IFI44 Antibody: Functions, Research Applications, and Scientific Insights

Introduction

IFI44 (Interferon-Induced Protein 44) is an important protein involved in immune responses, particularly in antiviral defense mechanisms. It plays a crucial role in interferon signaling pathways and is implicated in autoimmune diseases, viral infections, and cancer research. IFI44 antibodies are widely used in immunological studies to investigate inflammatory processes and immune system regulation.

This article explores the characteristics, research applications, and clinical significance of IFI44 Antibody, incorporating references from government (.gov) and educational (.edu) sources to provide reliable scientific insights.

What is IFI44 Antibody?

IFI44 is an interferon-stimulated gene (ISG) that is strongly upregulated in response to viral infections and inflammatory stimuli. The IFI44 antibody is used to detect and analyze IFI44 protein expression in biological samples.

For an overview of interferon-stimulated genes like IFI44, visit NCBI’s Gene Database.

Product Specifications

  • Host Species: Rabbit/Goat
  • Target: IFI44 Protein
  • Form: Polyclonal/Monoclonal
  • Purity: Affinity-purified
  • Buffer Composition: PBS, pH 7.4
  • Preservative: 0.02% Sodium Azide
  • Applications: Western Blotting, Immunohistochemistry (IHC), ELISA, Flow Cytometry

For technical specifications, refer to FDA’s antibody-based assay guidelines.

Key Research Applications

1. Immunology and Viral Infections

IFI44 is highly responsive to viral infections, particularly those involving RNA viruses like influenza and SARS-CoV-2. It serves as a biomarker for viral immunity studies.

For further information, visit Centers for Disease Control and Prevention (CDC).

2. Autoimmune Disease Research

Dysregulation of IFI44 expression has been linked to autoimmune diseases such as lupus and rheumatoid arthritis, making it an important target in immunological studies.

Find more at National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS).

3. Cancer Research

IFI44 plays a role in tumor immunology by regulating the immune response to cancer cells. It is being investigated as a potential biomarker in oncology research.

Explore research studies at National Cancer Institute (NCI).

Advantages of Using IFI44 Antibody

1. High Specificity and Sensitivity

IFI44 antibodies provide precise detection with minimal background interference.

2. Wide Range of Applications

Compatible with Western blotting, ELISA, IHC, and Flow Cytometry.

3. Reliable in Immunology, Autoimmune, and Cancer Research

IFI44’s role in multiple biological processes makes it a crucial target in various research fields.

For comparisons of commercial IFI44 antibodies, visit ABRF’s Antibody Validation Resource.

Storage and Handling Recommendations

  • Store at -20°C or below for long-term stability.
  • Avoid repeated freeze-thaw cycles to maintain antibody integrity.
  • Prepare working dilutions fresh before use.

For best practices on antibody storage, visit National Center for Biotechnology Information (NCBI).

Alternative Products and Vendors

  • Cell Signaling Technology (CST): Provides validated IFI44 antibodies for Western blotting.
  • Abcam: Supplies a range of polyclonal and monoclonal IFI44 antibodies.
  • Santa Cruz Biotechnology: Offers IFI44 antibodies suitable for IHC and ELISA.

For independent reviews, visit NIH’s Antibody Resource Guide.

Regulatory and Ethical Considerations

Before using antibodies in diagnostic applications, comply with regulatory standards outlined by the FDA and Office for Human Research Protections (OHRP).

Conclusion

IFI44 Polyclonal Antibody is an invaluable tool for researchers studying immunology, autoimmune diseases, and oncology. With its high specificity and versatile applications, it plays a crucial role in advancing scientific understanding of immune responses and disease mechanisms.

For additional information, refer to PubMed and Centers for Disease Control and Prevention (CDC) for peer-reviewed studies on IFI44-related research.

 

Posted in Blogging | Comments Off on IFI44 Antibody: Functions, Research Applications, and Scientific Insights

SHOX2 Polyclonal Antibody: Functions, Research Applications, and Scientific Insights

Introduction

SHOX2 (Short Stature Homeobox 2) is a transcription factor crucial in skeletal development and cardiac conduction. Mutations or dysregulation of SHOX2 have been associated with congenital heart defects, short stature syndromes, and certain cancers. SHOX2 polyclonal antibodies are widely used in developmental biology, cardiology, and oncology research.

This article explores the characteristics, research applications, and clinical significance of SHOX2 Polyclonal Antibody, incorporating references from government (.gov) and educational (.edu) sources to provide reliable scientific insights.

What is SHOX2 Antibody?

SHOX2 is a key homeobox gene involved in regulating gene expression for limb and heart development. The SHOX2 polyclonal antibody is commonly used to detect and analyze SHOX2 protein expression in biological samples.

For an overview of homeobox genes like SHOX2, visit NCBI’s Gene Database.

Product Specifications

  • Host Species: Rabbit/Goat
  • Target: SHOX2 Protein
  • Form: Polyclonal
  • Purity: Affinity-purified
  • Buffer Composition: PBS, pH 7.4
  • Preservative: 0.02% Sodium Azide
  • Applications: Western Blotting, Immunohistochemistry (IHC), ELISA, Chromatin Immunoprecipitation (ChIP)

For technical specifications, refer to FDA’s antibody-based assay guidelines.

Key Research Applications

1. Skeletal Development Research

SHOX2 is involved in limb formation, and its mutations contribute to conditions such as Léri-Weill dyschondrosteosis and Langer mesomelic dysplasia.

Find more at National Institute of Child Health and Human Development (NICHD).

2. Cardiac Research

SHOX2 is essential for pacemaker cell development in the sinoatrial node, making it a target for studying heart arrhythmias and conduction disorders.

For research on SHOX2 in cardiology, visit National Heart, Lung, and Blood Institute (NHLBI).

3. Cancer Research

SHOX2 overexpression has been linked to lung and nasopharyngeal cancers, making it a potential biomarker for early cancer detection.

Explore research studies at National Cancer Institute (NCI).

Advantages of Using SHOX2 Antibody

1. High Specificity and Sensitivity

SHOX2 antibodies provide precise detection with minimal background interference.

2. Wide Range of Applications

Compatible with Western blotting, ELISA, IHC, and ChIP.

3. Reliable in Skeletal, Cardiac, and Cancer Research

SHOX2’s role in multiple biological processes makes it a crucial target in various research fields.

For comparisons of commercial SHOX2 antibodies, visit ABRF’s Antibody Validation Resource.

Storage and Handling Recommendations

  • Store at -20°C or below for long-term stability.
  • Avoid repeated freeze-thaw cycles to maintain antibody integrity.
  • Prepare working dilutions fresh before use.

For best practices on antibody storage, visit National Center for Biotechnology Information (NCBI).

Alternative Products and Vendors

  • Cell Signaling Technology (CST): Provides validated SHOX2 antibodies for Western blotting.
  • Abcam: Supplies a range of polyclonal SHOX2 antibodies.
  • Santa Cruz Biotechnology: Offers SHOX2 antibodies suitable for IHC and ELISA.

For independent reviews, visit NIH’s Antibody Resource Guide.

Regulatory and Ethical Considerations

Before using antibodies in diagnostic applications, comply with regulatory standards outlined by the FDA and Office for Human Research Protections (OHRP).

Conclusion

SHOX2 Polyclonal Antibody is an invaluable tool for researchers studying skeletal development, cardiac biology, and oncology. With its high specificity and versatile applications, it plays a crucial role in advancing scientific understanding of morphogenesis and disease mechanisms.

For additional information, refer to PubMed and Centers for Disease Control and Prevention (CDC) for peer-reviewed studies on SHOX2-related research.

 

Posted in Blogging | Comments Off on SHOX2 Polyclonal Antibody: Functions, Research Applications, and Scientific Insights

Rabbit Anti-HOXA13 Antibody: Functions, Research Applications, and Scientific Insights

Introduction

HOXA13 (Homeobox A13) is a transcription factor crucial in limb and genital development. Mutations or dysregulation of HOXA13 have been linked to congenital limb malformations and certain cancers. Rabbit anti-HOXA13 antibodies are extensively used in developmental biology, cancer research, and gene regulation studies.

This article explores the characteristics, research applications, and clinical significance of Rabbit Anti-HOXA13 Antibody, incorporating references from government (.gov) and educational (.edu) sources to provide reliable scientific insights.

What is HOXA13 Antibody?

HOXA13 is a homeobox transcription factor involved in the regulation of genes necessary for limb formation and urogenital development. The Rabbit anti-HOXA13 antibody is widely used to detect and analyze HOXA13 protein expression in biological samples.

For an overview of homeobox genes like HOXA13, visit NCBI’s Gene Database.

Product Specifications

  • Host Species: Rabbit
  • Target: HOXA13 Protein
  • Form: Monoclonal/Polyclonal
  • Purity: Affinity-purified
  • Buffer Composition: PBS, pH 7.4
  • Preservative: 0.02% Sodium Azide
  • Applications: Western Blotting, Immunohistochemistry (IHC), ELISA, Chromatin Immunoprecipitation (ChIP)

For technical specifications, refer to FDA’s antibody-based assay guidelines.

Key Research Applications

1. Developmental Biology

HOXA13 plays a pivotal role in limb and genital development. Mutations in HOXA13 lead to congenital disorders like hand-foot-genital syndrome.

Find more at National Institute of Child Health and Human Development (NICHD).

2. Cancer Research

HOXA13 overexpression has been observed in prostate, bladder, and colorectal cancers, making it a promising biomarker and therapeutic target.

For research on HOXA13 in cancer, explore National Cancer Institute (NCI).

3. Gene Regulation Studies

HOXA13 is a key regulator of downstream genes critical in morphogenesis. Chromatin Immunoprecipitation (ChIP) using HOXA13 antibodies helps study its binding sites and regulatory mechanisms.

For detailed gene expression data, visit ENCODE Project.

Advantages of Using HOXA13 Antibody

1. High Specificity and Sensitivity

HOXA13 antibodies provide precise detection with minimal background interference.

2. Wide Range of Applications

Compatible with Western blotting, ELISA, IHC, and ChIP.

3. Reliable in Developmental and Cancer Research

HOXA13’s role in multiple biological processes makes it a crucial target in various research fields.

For comparisons of commercial HOXA13 antibodies, visit ABRF’s Antibody Validation Resource.

Storage and Handling Recommendations

  • Store at -20°C or below for long-term stability.
  • Avoid repeated freeze-thaw cycles to maintain antibody integrity.
  • Prepare working dilutions fresh before use.

For best practices on antibody storage, visit National Center for Biotechnology Information (NCBI).

Alternative Products and Vendors

  • Cell Signaling Technology (CST): Provides validated HOXA13 antibodies for Western blotting.
  • Abcam: Supplies a range of monoclonal and polyclonal HOXA13 antibodies.
  • Santa Cruz Biotechnology: Offers HOXA13 antibodies suitable for IHC and ELISA.

For independent reviews, visit NIH’s Antibody Resource Guide.

Regulatory and Ethical Considerations

Before using antibodies in diagnostic applications, comply with regulatory standards outlined by the FDA and Office for Human Research Protections (OHRP).

Conclusion

Rabbit anti-HOXA13 Antibody is an invaluable tool for researchers studying developmental biology, cancer, and gene regulation. With its high specificity and versatile applications, it plays a crucial role in advancing scientific understanding of morphogenesis and oncogenesis.

For additional information, refer to PubMed and Centers for Disease Control and Prevention (CDC) for peer-reviewed studies on HOXA13-related research.

 

Posted in Blogging | Comments Off on Rabbit Anti-HOXA13 Antibody: Functions, Research Applications, and Scientific Insights

POK7 Antibody: Functions, Research Applications, and Scientific Insights

Introduction

POK7 (Pokemon Family Transcription Factor 7) is a zinc-finger protein involved in gene regulation, cell differentiation, and tumorigenesis. Antibodies targeting POK7 are essential in studying its role in cancer research, neurobiology, and developmental biology.

This article explores the characteristics, research applications, and clinical significance of POK7 Antibody, incorporating references from government (.gov) and educational (.edu) sources to provide reliable scientific insights.

What is POK7 Antibody?

POK7 is a transcriptional repressor that regulates gene expression by modifying chromatin accessibility. It plays a crucial role in cellular differentiation and oncogenic pathways. POK7 antibodies are utilized in various immunological assays to detect and analyze protein expression in biological samples.

For an overview of transcription factors like POK7, visit NCBI’s Gene Database.

Product Specifications

  • Host Species: Rabbit/Mouse
  • Target: POK7 Protein
  • Form: Monoclonal/Polyclonal
  • Purity: Affinity-purified
  • Buffer Composition: PBS, pH 7.4
  • Preservative: 0.02% Sodium Azide
  • Applications: Western Blotting, Immunohistochemistry (IHC), ELISA, Flow Cytometry

For technical specifications, refer to FDA’s antibody-based assay guidelines.

Key Research Applications

1. Cancer Research

POK7 is implicated in tumorigenesis due to its role in repressing tumor suppressor genes. Studies have linked POK7 overexpression to malignancies such as leukemia and breast cancer.

For research on POK7 in cancer, explore National Cancer Institute (NCI).

2. Neurobiology

POK7 has a potential role in neural differentiation and brain development. Researchers study POK7’s involvement in neurodegenerative diseases and neurogenesis.

For neuroscience resources, visit National Institute of Neurological Disorders and Stroke (NINDS).

3. Developmental Biology

POK7 is involved in early embryonic development, making it an essential protein for studying gene regulation in developmental biology.

Find more at National Institute of Child Health and Human Development (NICHD).

Advantages of Using POK7 Antibody

1. High Specificity and Sensitivity

POK7 antibodies provide precise detection with minimal background interference.

2. Wide Range of Applications

Compatible with Western blotting, ELISA, IHC, and flow cytometry.

3. Reliable in Cancer and Neurobiology Research

POK7’s role in multiple biological processes makes it a crucial target in various research fields.

For comparisons of commercial POK7 antibodies, visit ABRF’s Antibody Validation Resource.

Storage and Handling Recommendations

  • Store at -20°C or below for long-term stability.
  • Avoid repeated freeze-thaw cycles to maintain antibody integrity.
  • Prepare working dilutions fresh before use.

For best practices on antibody storage, visit National Center for Biotechnology Information (NCBI).

Alternative Products and Vendors

  • Cell Signaling Technology (CST): Provides validated POK7 antibodies for Western blotting.
  • Abcam: Supplies a range of monoclonal and polyclonal POK7 antibodies.
  • Santa Cruz Biotechnology: Offers POK7 antibodies suitable for IHC and ELISA.

For independent reviews, visit NIH’s Antibody Resource Guide.

Regulatory and Ethical Considerations

Before using antibodies in diagnostic applications, comply with regulatory standards outlined by the FDA and Office for Human Research Protections (OHRP).

Conclusion

POK7 Antibody is an invaluable tool for researchers studying gene regulation, cancer, and neurobiology. With its high specificity and versatile applications, it plays a crucial role in advancing scientific understanding of transcriptional repression.

For additional information, refer to PubMed and Centers for Disease Control and Prevention (CDC) for peer-reviewed studies on POK7-related research.

 

Posted in Blogging | Comments Off on POK7 Antibody: Functions, Research Applications, and Scientific Insights

Rabbit Anti-Human IgG F(ab’)₂ Unconjugated (1 mg): Applications, Benefits, and Scientific Resources

Introduction

Rabbit anti-human IgG F(ab’)₂ fragments play a critical role in immunological research, offering advantages in various assay systems. These antibody fragments are highly specific, making them valuable in diagnostic and therapeutic applications. The unconjugated form of these antibodies is particularly useful for experiments requiring secondary labeling or precise immune detection.

This article explores the features, benefits, and applications of Rabbit Anti-Human IgG F(ab’)₂ Unconjugated (1 mg), incorporating references from government (.gov) and educational (.edu) sources to provide reliable scientific insights.

What is Rabbit Anti-Human IgG F(ab’)₂?

F(ab’)₂ fragments are derived from whole IgG molecules through pepsin digestion, which removes the Fc region while preserving the antigen-binding domains. This modification helps prevent non-specific binding to Fc receptors, improving the accuracy of immunoassays.

For a detailed overview of antibody fragmentation, visit NIH’s antibody guide.

Product Specifications

  • Host Species: Rabbit
  • Target: Human IgG (F(ab’)₂-specific)
  • Form: Unconjugated
  • Purity: Affinity-purified
  • Buffer Composition: 0.01M Sodium Phosphate, 0.25M NaCl, pH 7.6
  • Preservative: None
  • Applications: ELISA, Western blotting, Immunohistochemistry (IHC)

For additional technical specifications, refer to the FDA’s guidance on antibody-based assays.

Key Applications in Research and Diagnostics

1. ELISA (Enzyme-Linked Immunosorbent Assay)

ELISA is widely used for detecting and quantifying specific proteins in biological samples. Rabbit anti-human IgG F(ab’)₂ fragments enhance the assay’s specificity by reducing Fc-mediated interactions.

For an in-depth ELISA protocol, visit Harvard University’s Immunology Laboratory.

2. Western Blotting

Western blotting relies on antibody-antigen interactions to detect proteins in a sample. Using F(ab’)₂ fragments prevents background noise caused by Fc receptor binding, improving signal clarity.

Detailed methodology can be found at Stanford’s Western Blotting Resource.

3. Immunohistochemistry (IHC)

IHC is essential for visualizing antigen distribution in tissue samples. Rabbit anti-human IgG F(ab’)₂ enhances specificity in detecting human IgG in clinical and research settings.

A comprehensive IHC guide is available at Johns Hopkins Pathology Department.

Advantages of Using F(ab’)₂ Fragments

1. Reduced Background Noise

Since F(ab’)₂ fragments lack the Fc region, they do not bind to Fc receptors, minimizing non-specific interactions.

2. Enhanced Specificity

These antibody fragments bind exclusively to their target antigen, improving assay accuracy.

3. Ideal for Secondary Labeling

Unconjugated F(ab’)₂ fragments provide flexibility for researchers using different detection methods, such as fluorescence or enzyme-conjugated secondary antibodies.

For a comparative analysis of IgG and F(ab’)₂ fragments, check this study from the National Institute of Standards and Technology (NIST).

Storage and Handling Recommendations

Proper storage conditions ensure antibody stability and functionality:

  • Store at 2-8°C under sterile conditions.
  • Avoid repeated freeze-thaw cycles to maintain antibody integrity.
  • Prepare working dilutions fresh before use.

For best practices on antibody storage, visit the National Center for Biotechnology Information (NCBI).

Alternative Products and Vendors

Several companies provide similar rabbit anti-human IgG F(ab’)₂ antibodies.

  • Jackson ImmunoResearch: Offers high-purity F(ab’)₂ fragments for immunodetection.
  • ImmunoReagents, Inc.: Specializes in purified rabbit IgG F(ab’)₂ for various applications.
  • Bio-Rad Antibodies: Supplies both conjugated and unconjugated F(ab’)₂ antibodies for Western blotting and ELISA.

For independent reviews and comparisons of commercial antibodies, visit ABRF’s Antibody Validation Resource.

Regulatory and Ethical Considerations

Before using antibodies in clinical or diagnostic applications, it is essential to comply with regulatory guidelines. The U.S. Food and Drug Administration (FDA) provides detailed documentation on antibody-based diagnostics. Similarly, researchers working with human-derived samples must adhere to ethical guidelines outlined by the Office for Human Research Protections (OHRP).

Conclusion

Rabbit anti-human IgG F(ab’)₂ Unconjugated (1 mg) is a powerful tool in immunoassays, offering specificity and reliability in detecting human IgG. Its advantages include reduced background noise, enhanced specificity, and versatility in labeling methods. By following proper storage protocols and adhering to regulatory guidelines, researchers can maximize the efficiency and accuracy of their assays.

For further information, refer to reputable sources like the Centers for Disease Control and Prevention (CDC) and PubMed for peer-reviewed articles on antibody-based research.

 

Posted in Blogging | Comments Off on Rabbit Anti-Human IgG F(ab’)₂ Unconjugated (1 mg): Applications, Benefits, and Scientific Resources

VEGI (Vascular Endothelial Growth Inhibitor) (VEGI/1283), CF488A Conjugate, 0.1 mg/mL Antibody

The VEGI/1283 Antibody conjugated with CF488A, a bright green fluorescent dye, is specifically designed for detecting Vascular Endothelial Growth Inhibitor (VEGI). VEGI, a member of the tumor necrosis factor (TNF) superfamily, plays a critical role in regulating vascular endothelial cell proliferation, angiogenesis, and apoptosis.

This antibody is particularly useful for fluorescence-based applications such as immunofluorescence (IF), flow cytometry (FC), and other imaging techniques, allowing for precise localization and quantification of VEGI expression in various biological samples.

Key Features

  1. Specificity: High specificity for VEGI (TNFSF15), ensuring minimal cross-reactivity with related proteins.
  2. Fluorophore Conjugation: Labeled with CF488A, a highly photostable green fluorescent dye with excitation/emission at 490/515 nm.
  3. High Sensitivity: Suitable for low-abundance target detection due to enhanced fluorescence intensity.
  4. Concentration: Provided at 0.1 mg/mL, ready for direct application in assays.

Applications

  • Immunofluorescence (IF): For visualizing VEGI expression in tissue sections or cultured cells.
  • Flow Cytometry (FC): For quantitative analysis of VEGI expression on cell surfaces or within cells.
  • Confocal Microscopy: High-resolution imaging of VEGI distribution in biological systems.
  • Angiogenesis Research: Evaluating VEGI’s role in endothelial cell function and vascular development.

Storage and Stability

  • Storage Conditions: Store at 4°C in the dark. Avoid repeated freeze-thaw cycles to maintain antibody activity.
  • Stability: Stable for at least 12 months from the date of purchase when stored properly.

Product Details

Attribute Specification
Clone VEGI/1283
Host Rabbit
Conjugate CF488A (Green)
Concentration 0.1 mg/mL
Formulation PBS, pH 7.4, with 0.09% sodium azide
Applications IF, FC, Confocal Microscopy

Recommended Protocols

1. Immunofluorescence

  1. Fix cells with 4% paraformaldehyde for 10 minutes.
  2. Permeabilize with 0.1% Triton X-100 for 5 minutes.
  3. Block with 5% BSA for 30 minutes.
  4. Incubate with VEGI/1283-CF488A antibody (dilution: 1:100) for 1 hour at room temperature.
  5. Wash with PBS and counterstain with DAPI for nuclear visualization.
  6. Mount and image using a fluorescence microscope.

2. Flow Cytometry

  1. Prepare a single-cell suspension and wash with PBS.
  2. Fix and permeabilize cells using an appropriate fixation buffer.
  3. Incubate cells with the VEGI/1283 antibody (dilution: 1:50) for 30 minutes on ice.
  4. Wash and analyze using a flow cytometer with a 488 nm laser.

Research Applications

  1. Cancer Research: VEGI’s role in tumor microenvironment regulation.
  2. Angiogenesis Studies: Exploring anti-angiogenic properties for therapeutic purposes.
  3. Vascular Diseases: Understanding VEGI’s function in pathological conditions like atherosclerosis or ischemia.

References

  • Detailed studies and protocols are available from PubMed and NIH, highlighting VEGI’s role in vascular biology.
  • Explore more about the CF488A dye and its applications at Biotium.

Disclaimer

This product is for research use only and not intended for diagnostic or therapeutic use. Ensure proper handling and disposal according to laboratory safety standards.

Let me know if you need further details or additional applications for this product!

Posted in Blogging | Comments Off on VEGI (Vascular Endothelial Growth Inhibitor) (VEGI/1283), CF488A Conjugate, 0.1 mg/mL Antibody

BS69 Polyclonal Antibody: A Key Tool for Transcriptional Regulation Research

The BS69 Polyclonal Antibody is a critical research tool for studying the functions of the BS69 (ZMYND11) protein, which plays a significant role in transcriptional regulation, chromatin remodeling, and cancer biology. As a transcriptional co-repressor, BS69 interacts with multiple transcription factors and signaling pathways, making it an important focus for molecular and cellular biology research.

What is BS69 (ZMYND11)?

BS69, also known as ZMYND11, is a zinc finger MYND-type containing protein. It functions as a transcriptional co-repressor, modulating gene expression through chromatin remodeling. BS69 is associated with tumor suppression, particularly in breast cancer, prostate cancer, and glioblastoma. Its ability to bind histone modifications, such as H3K36me3, links it directly to transcriptional elongation regulation.

To learn more about BS69’s role in transcription, visit the National Institutes of Health (NIH) and PubMed.

Applications of BS69 Polyclonal Antibody

  1. Cancer Research
    BS69 has been identified as a tumor suppressor in various cancers. Its interaction with histones and transcription factors provides insights into how gene expression changes in tumorigenesis. Research studies on this topic are available at the National Cancer Institute (NCI) and NCBI.
  2. Epigenetics and Chromatin Biology
    BS69 binds to methylated histone H3, specifically H3K36me3, to regulate transcription elongation. This antibody enables detailed investigation of epigenetic modifications. Explore the role of histone methylation at NIH Epigenomics Program.
  3. Signal Transduction Pathways
    BS69 interacts with multiple signaling pathways, including Ras and MYC, impacting cellular proliferation and differentiation. For pathway insights, refer to resources on KEGG Pathway Database.

Key Features of BS69 Polyclonal Antibody

  • High Sensitivity and Specificity:
    This antibody ensures accurate detection of BS69 in Western blotting, immunofluorescence (IF), and immunoprecipitation (IP) assays. For validation methods, visit Protein Data Bank (PDB) and UniProt.
  • Cross-Species Reactivity:
    The antibody is validated for use in human, mouse, and rat samples. Cross-reactivity details can be found on Mouse Genome Informatics (MGI).
  • Reliable for Multiple Applications:
    From chromatin immunoprecipitation (ChIP) to protein interaction studies, the BS69 Polyclonal Antibody supports diverse experimental workflows. Detailed protocols are available on Protocols.io.

Scientific Importance of BS69

  1. Role in Transcriptional Repression
    BS69 suppresses gene expression by interacting with transcription factors such as MYC and E2F. Its ability to bind chromatin-associated proteins underscores its importance in transcriptional regulation. Explore more at Science.gov and PubMed Central.
  2. Tumor Suppressor Activity
    The loss of BS69 function is linked to tumor progression in various cancers. Researchers are actively exploring its therapeutic potential. Find related research at the National Cancer Institute (NCI).
  3. Epigenetic Reader Function
    BS69 functions as a reader of histone marks, particularly H3K36me3, linking chromatin structure to transcriptional dynamics. More details on chromatin interactions are provided by the Epigenomics Roadmap.

Experimental Applications

  1. Western Blotting
    Use BS69 Polyclonal Antibody to detect BS69 protein levels in lysates. Protocols for Western blotting are accessible at BioProtocol.
  2. Chromatin Immunoprecipitation (ChIP)
    The antibody facilitates ChIP assays to investigate BS69’s binding to specific genomic regions. Explore detailed protocols on ChIP-seq resources from ENCODE.
  3. Immunofluorescence (IF)
    Visualize BS69 localization in cells using immunofluorescence. Guidelines are available on NIH ImageJ.
  4. Co-immunoprecipitation (Co-IP)
    Identify BS69 interaction partners using Co-IP with this antibody. Co-IP methods can be reviewed on ScienceDirect.

Conclusion

The BS69 Polyclonal Antibody is an indispensable tool for advancing our understanding of transcriptional regulation, chromatin biology, and tumor suppression. Its versatility across experimental applications makes it a valuable resource for researchers in molecular biology and cancer research. For more resources, visit National Library of Medicine, CDC, and NIH Research Tools.

Would you like assistance in setting up experiments or accessing additional scientific resources for BS69 research?

Posted in Blogging | Comments Off on BS69 Polyclonal Antibody: A Key Tool for Transcriptional Regulation Research

The MTS Cell Proliferation Colorimetric Assay Kit

The MTS Cell Proliferation Colorimetric Assay Kit by AffiGEN is a widely used and reliable method for measuring cell viability and proliferation. This non-radioactive, colorimetric assay is based on the reduction of the MTS tetrazolium compound into a soluble formazan product by metabolically active cells. The intensity of the color produced correlates directly with the number of viable cells in a population, making it an essential tool in cell biology, toxicology, and drug discovery.

How the MTS Cell Proliferation Assay Works

The MTS assay relies on the reduction of the MTS compound by NAD(P)H-dependent enzymes present in metabolically active cells. The process leads to the formation of a colored, water-soluble formazan product that can be quantified using a microplate reader. The key steps of the assay include:

  1. Cell Seeding: Cells are seeded into a 96-well plate and allowed to adhere and grow.
  2. Addition of MTS Reagent: The MTS reagent is added to each well.
  3. Incubation: Cells are incubated with the reagent, allowing viable cells to convert the MTS into a formazan product.
  4. Measurement: After incubation, the absorbance of the formazan product is measured at 490 nm using a microplate reader. The absorbance is proportional to the number of viable cells in the sample.

Applications of the MTS Cell Proliferation Assay Kit

  1. Cell Proliferation Studies: The MTS assay is frequently used to assess cell growth and proliferation rates under different conditions, such as treatment with growth factors or inhibitors. According to NIH, the assay is highly sensitive and reproducible, making it ideal for quantifying cell proliferation.
  2. Cytotoxicity Testing: One of the primary applications of the MTS assay is in toxicology for evaluating the cytotoxic effects of chemicals, drugs, and environmental factors on cell populations. The assay provides a rapid and accurate means of determining cell viability after exposure to test substances, as highlighted by PubMed Central (PMC).
  3. Drug Discovery and Screening: The MTS assay is an indispensable tool in high-throughput screening (HTS) for identifying compounds that affect cell viability or proliferation. The FDA notes that colorimetric assays like MTS are commonly employed in the pharmaceutical industry to assess the potential cytotoxic effects of new drug candidates.
  4. Cancer Research: In cancer biology, the MTS assay is used to measure the proliferation rates of cancer cells in response to chemotherapeutic agents or other treatments. Research published by Johns Hopkins University has shown that the MTS assay is a valuable tool for studying cancer cell survival and treatment efficacy.

Advantages of the MTS Cell Proliferation Assay Kit by AffiGEN

  1. Non-Radioactive: Unlike traditional cell proliferation assays that use radioactive materials (e.g., MTT assay), the MTS assay is a safer alternative, eliminating the need for hazardous materials handling and disposal.
  2. Simplified Workflow: The MTS assay involves fewer steps than other tetrazolium assays, such as MTT. Since the formazan product is soluble, there is no need for an additional solubilization step, simplifying the protocol and reducing assay time.
  3. High Sensitivity: The MTS assay provides high sensitivity, detecting even small changes in cell viability. This is especially useful for applications like drug screening, where detecting subtle cytotoxic effects is crucial.
  4. Versatility: The MTS assay is compatible with various cell types, including adherent and suspension cells, making it a versatile option for multiple research areas, as noted by NIH.
  5. Cost-Effective: The assay is cost-effective for high-throughput applications, with large-scale screening in 96-well or 384-well plate formats. This makes it an ideal choice for large-scale cytotoxicity testing or drug discovery experiments, as outlined by the FDA.

Practical Considerations and Limitations

  1. Incubation Time: The length of the incubation period with the MTS reagent can vary depending on cell type and density. Optimizing the incubation time is essential to obtain accurate results, as mentioned by Harvard University.
  2. Interference with Reducing Agents: Compounds that interact with cellular reducing pathways can interfere with the MTS assay results. Researchers should validate their experimental design to minimize potential interference.
  3. Plate Reader Calibration: Proper calibration of the microplate reader is essential to ensure accurate quantification of the formazan product. Absorbance measurements should be taken within a specific range to avoid potential inaccuracies.

Conclusion

The MTS Cell Proliferation Colorimetric Assay Kit by AffiGEN is a powerful, reliable, and safe tool for measuring cell viability and proliferation in a wide range of applications, including toxicology, drug screening, and cancer research. Its ease of use, combined with high sensitivity and non-radioactive nature, makes it a preferred choice for both academic and industrial research.

As noted by NIH and FDA, assays like MTS are crucial for advancing our understanding of cellular responses to various stimuli, contributing significantly to the fields of molecular biology, biotechnology, and pharmaceutical development.

Posted in Blogging | Comments Off on The MTS Cell Proliferation Colorimetric Assay Kit

pENTR223.1 Plasmid

Abstract

pENTR223.1 plasmid -LC is a gateway cloning vector for bacterial expression. The vector is 3375 bp in size and contains the pBR322 origin of replication. This vector carries two genes, ccdB and CmR, in the region that will be replaced by cloned DNA segments. The ccdB gene (DNA gyrase inhibitor) provides strong negative selection against vector molecules that retain this region, while CmR (chloramphenicol resistance gene) provides positive selection for the propagation of the vector. The sequencing primers are T7, M13 and M13reverse. pENTR223.1-LC is resistant to spectinomycin up to 100 ug/ml.

Bottom

Valuable collections of clones encoding the complete ORFeomes for some model organisms have been built following the completion of their genome sequencing projects. These libraries are based on Gateway cloning technology, which facilitates the study of protein function by simplifying the subcloning of open reading frames (ORFs) into any suitable target vector.

The expression of proteins of interest as fusions with functional modules is a frequent approach in their initial functional characterization. A limited number of Gateway target expression vectors allow the construction of fusion proteins from ORFeome-derived sequences but are restricted to the possibilities offered by their built-in functional modules and predefined model organism specificity. Therefore, the availability of cloning systems that overcome these limitations would be highly advantageous.

Construction of pEF5/FRT/V5-DEST-R4-R3

Adaptation of pEF5/FRT/V5-DEST for MultiSite Gateway cloning was carried out as described by Magnani et al, with modifications. Briefly, an LR recombination reaction was carried out at 25 °C for 16 h between plasmids pEF5/FRT/V5-DEST_CamS (see above) and pDONR221-R4-R3. Importantly, the attR4/attR3 sites in pDONR221-R4-R3 cannot recombine with the juxtaposed attL1/attL2 sites. After transformation of the reaction into code Survival™ 2 T1R competent cells, cultures were plated on LB/agar plates containing ampicillin and chloramphenicol to select for colonies harbouring the recombined pEF5/FRT/V5-DEST plasmid.

In this way, the standard Gateway cassette flanked by attR1/attR2 in pEF5/FRT/V5-DEST was replaced by the Gateway MultiSite cassette flanked by attR4/attR3, obtaining pEF5/FRT/V5-DEST-R4-R3, which was ready for a MultiSite LR recombination cloning reaction with the three modules that would constitute the chosen fusion protein.

Molecular biology

The PCR reactions were carried out with AccuPrime Pfx SuperMix (Life Technologies) as indicated by the manufacturer. Plasmids pDONR and the cloning vector PDT-R4-R3 were obtained as part of the MultiSite Gateway Cloning Kit (Life Technologies Catalog No. 12537023). The pEF5/FRT/V5-DEST destination expression vector was obtained from Life Technologies (catalogue #V6020-20). This is a vector for cloning and expressing proteins in FLP-In™ isogenic cell lines.

The expression of cloned proteins is driven by the human elongation factor 1α promoter located upstream of the Gateway cassette. The vector has an FRT recombination site that mediates FLP recombinase-directed integration of the vector into a unique homologous FRT site in the genome of FLP-In™ cell lines, and the hygromycin resistance gene acts as a selectable marker for integration. However, it behaves like any other expression vector in transient transfection experiments.

BP and LR recombination reactions were carried out with BP clonase II and LR Clonase II Plus enzyme mixtures, respectively (Life Technologies), following the manufacturer’s instructions. Reactions were stopped by the addition of proteinase K and incubation at 37°C for 10 min. All competent strains of E. coli were obtained from Life Technologies and used in a one-shot format for plasmid transformation. LB medium was supplemented where indicated with selection antibiotics at the following concentrations: ampicillin (100 μg/mL), kanamycin (50 μg/mL), chloramphenicol (50 μg/mL).

Results

We present a versatile cloning toolkit for constructing fully customizable three-part fusion proteins based on the MultiSite Gateway Cloning System. The components of the fusion protein are encoded on the three integral plasmids of the kit. These can be recombined with any purposely designed target vector using a heterologous promoter external to the Gateway cassette, leading to in-frame cloning of an ORF of interest flanked by two functional modules.

Unlike previous systems, a third part is available for peptide encoding as it no longer needs to contain a promoter, resulting in a greater number of possible fusion combinations. We have constructed the component plasmids of the kit and demonstrated their functionality by providing proof-of-principle data on the expression of prototype fluorescent fusions in transiently transfected cells.

Conclusions

We have developed a set of tools to create fusion proteins with custom N- and C-term modules from Gateway input clones encoding ORFs of interest. Importantly, our method allows input clones obtained from ORFeome collections to be used without prior modification. Using this technology, any existing Gateway target expression vector with its template-specific properties could be easily adapted to express fusion proteins.

Posted in Blog | Comments Off on pENTR223.1 Plasmid

pUC Plasmid

Abstract

A series of plasmid vectors containing the multiple cloning site (MCS7) of M13mp7 have been constructed. In one of these vectors, a kanamycin resistance marker has been inserted into the centre of the symmetrical MCS7 to produce a restriction site mobilizer (RSM) element. The drug resistance marker can be excised from this vector with any of the restriction enzymes that recognize a site in the RSM flanking sequences to generate an RSM with various sticky ends or blunt ends. These fragments can be used for insertional mutagenesis of any target molecule with compatible restriction sites.

Insertion mutants are selected for their resistance to kanamycin. When the drug resistance marker is removed with PstI, a small in-frame insert can be generated. In addition, two new MCS have been formed that have unique restriction sites by disrupting the symmetrical structure of MCS7. The resulting plasmids pUC8 and pUC9 allow separate double-digested restriction fragments to be cloned in both orientations relative to the lac promoter. The terminal sequences of any DNA cloned into these plasmids can be characterized using the M13 universal primers.

pUC plasmid vectors are used as cloning vectors and belong to the pUC series (named after the place of their initial preparation, ie, the University of California). These plasmids are 2700 bp long and contain

  • Ampicillin resistance gene
  • Origin of replication derived from pBR322,
  • lacZ gene derived from E. coli. Also found within the lac region is a polylinker sequence that has unique restriction sites (identical to those found in phage M13), and
  • Multiple Cloning Sites (MCS).

These plasmids, when transformed into an appropriate E.coli strain having lac (eg, JM103, JMI09), and grown in the presence of IPTG (isopropyl thiogalactoside, which behaves like lactose and induces lactose synthesis). of the enzyme galactosidase f3) and X-gal (substrate for the enzyme), will give rise to white or clear colonies.

On the other hand, the pUC that does not have inserts and is transformed into bacteria will have an active lacZ gene and will therefore produce blue colonies, which will make it possible to identify the colonies that have the pUC vector with cloned DNA segments.

As discussed above, in pBR322 and pBR327, the DNA is inserted into a site located in one of the two antibiotic resistance genes, thereby inactivating one of the two resistance genes. The insert-carrying plasmid can be selected for its ability to grow in a medium containing only one of the two antibiotics and for its inability to grow in a medium containing both antibiotics.

On the other hand, plasmids that do not carry an insert grow in media containing one or both antibiotics. Thus, the presence of the lacZ gene in pUC and ampicillin and tetracycline resistance genes in pBR322 and pBR327 allow selection of E. coli colonies transformed with plasmids carrying the desired foreign cloned DNA segment.

pUC19 is a commonly used high copy cloning vector. The vector encodes the N-terminal fragment of β-galactosidase (Lanza), which allows detection of blue/white colonies (i.e. complement a), as well as a pUC origin of replication and an ampicillin resistance gene that allow propagation and selection. in E. coli.

An important feature of pUC plasmids is the blue/white colony screen to detect recombinant plasmids. This selection is based on the inactivation of the Lanza peptide of beta-galactosidase, which is expressed by the vector. Cloning vectors belonging to the pUC family are available in pairs with reverse orders of restriction sites relative to the lacZ promoter. pUC8 and PUC9 form one such pair. Other similar pairs include pUC12 and pUCl3 or pUC18 and pUC19.

Disadvantages of pUC vectors

The basis of genomic sequence analysis is the large-scale cloning and sequencing of shotgun plasmid libraries obtained by assembling sequences from the vast majority of clones.

  • Breaches in shotgun libraries and unclonable DNA fragments are quite common. DNA is characterized by high AT content, strong secondary structure, open reading frames, or cis-acting functions (eg, transcriptional promoters or origins of replication).
  • In some cases, most notably in AT-rich DNA, the reasons for the difficulty in cloning are not well defined.
Posted in Blog | Comments Off on pUC Plasmid